chr7:150648632:A>G Detail (hg19) (KCNH2)

Information

Genome

Assembly Position
hg19 chr7:150,648,632-150,648,632
hg38 chr7:150,951,544-150,951,544 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq NM_172057.2:c.829T>C NP_742054.1:p.Phe277Leu
NM_000238.3:c.1849T>C NP_000229.1:p.Phe617Leu
Ensemble ENST00000330883.9:c.829T>C ENST00000330883.9:p.Phe277Leu
Summary

MGeND

Clinical significance Likely pathogenic Pathogenic
Variant entry 2
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Uncertain significance
Review star
Show details
Links
Type Database ID Link
Gene MIM 152427 OMIM
HGNC 6251 HGNC
Ensembl ENSG00000055118 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
MGeND
Clinical significance Last evaluated Condition Origin Submission ID Submitter Institute Citation Comment Image
Likely pathogenic 2017/03/30 long QT syndrome 2 (LQT2) germline MGS000001
(TMGS000137) 		Kenjiro Kosaki Keio University
Pathogenic other germline MGS000001
(TMGS000137) 		Kenjiro Kosaki Keio University
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Uncertain significance 2019-03-06 criteria provided, single submitter long QT syndrome germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.388 long QT syndrome NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000238.4(KCNH2):c.1849T>C (p.Phe617Leu) AND Long QT syndrome ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs796052195 dbSNP
Genome
hg19
Position
chr7:150,648,632-150,648,632
Variant Type
snv
Reference Allele
A
Alternative Allele
G
Genome browser